What kind of filter do you have?
How old is it?
What kind of noises does it make?
Is the impeller facing the correct way?
When you cleaned the filter out did you wipe away any oil or lube?
Try filling your tank like 99% full so the water is almost touching the filter. (this helps when your trying to prime the filter to get a steady flow)
Also try and find the instructions from the filter box to see if you didn't connect something correctly ect.
Of course I must ask this though.... Is it pluged in?
Answer those questions above and I'm sure someone else or myself can figure something out. If all else fails you just might have to get a new filter.